STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05499.1PFAM: protein of unknown function DUF1646; KEGG: ate:Athe_2278 cation transporter-like protein. (359 aa)    
Predicted Functional Partners:
ADQ05498.1
PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0229 DNA polymerase beta subunit.
 
     0.807
ADQ05497.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
 
     0.568
ADQ04996.1
KEGG: csc:Csac_2247 hypothetical protein.
  
     0.555
ADQ05049.1
KEGG: csc:Csac_2306 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.532
ADQ03661.1
PFAM: Protein of unknown function YycH; KEGG: ate:Athe_0084 hypothetical protein.
  
     0.474
ADQ04936.1
KEGG: ate:Athe_1640 hypothetical protein.
  
     0.423
ADQ03810.1
PFAM: LmbE family protein; KEGG: ate:Athe_0312 LmbE family protein.
  
     0.422
ADQ05235.1
PFAM: Coat F domain protein; KEGG: ate:Athe_1976 coat F domain protein.
  
     0.411
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.