Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADQ05512.1 | ADQ05513.1 | Calow_1992 | Calow_1993 | KEGG: ate:Athe_2295 S-layer domain protein. | PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2446 hypothetical protein. | 0.592 |
ADQ05512.1 | birA | Calow_1992 | Calow_0146 | KEGG: ate:Athe_2295 S-layer domain protein. | biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.445 |
ADQ05512.1 | macB | Calow_1992 | Calow_1994 | KEGG: ate:Athe_2295 S-layer domain protein. | ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.609 |
ADQ05513.1 | ADQ05512.1 | Calow_1993 | Calow_1992 | PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2446 hypothetical protein. | KEGG: ate:Athe_2295 S-layer domain protein. | 0.592 |
ADQ05513.1 | macB | Calow_1993 | Calow_1994 | PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2446 hypothetical protein. | ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.999 |
birA | ADQ05512.1 | Calow_0146 | Calow_1992 | biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | KEGG: ate:Athe_2295 S-layer domain protein. | 0.445 |
macB | ADQ05512.1 | Calow_1994 | Calow_1992 | ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | KEGG: ate:Athe_2295 S-layer domain protein. | 0.609 |
macB | ADQ05513.1 | Calow_1994 | Calow_1993 | ABC transporter related protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | PFAM: protein of unknown function DUF214; KEGG: csc:Csac_2446 hypothetical protein. | 0.999 |