STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05589.1KEGG: ate:Athe_2349 hypothetical protein. (239 aa)    
Predicted Functional Partners:
ADQ05590.1
KEGG: ate:Athe_2350 hypothetical protein.
       0.664
ADQ05591.1
KEGG: ate:Athe_2351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.664
ADQ05592.1
KEGG: ate:Athe_2352 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.664
ADQ05588.1
KEGG: ate:Athe_2348 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.648
ADQ05587.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_2347 hypothetical protein.
       0.639
ADQ05593.1
KEGG: ate:Athe_2353 hypothetical protein.
       0.438
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.