Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05593.1KEGG: ate:Athe_2353 hypothetical protein. (667 aa)    
Predicted Functional Partners:
ADQ04138.1
KEGG: ate:Athe_0697 hypothetical protein.
  
     0.662
ADQ05619.1
KEGG: tit:Thit_1727 pectate disaccharide-lyase; PFAM: S-layer domain-containing protein; Ig domain protein.
  
     0.636
ADQ04145.1
PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein; KEGG: ate:Athe_0704 transketolase central region.
  
     0.518
ADQ05565.1
PFAM: lipolytic protein G-D-S-L family; KEGG: ate:Athe_2325 lipolytic protein G-D-S-L family.
  
     0.517
ADQ05590.1
KEGG: ate:Athe_2350 hypothetical protein.
       0.501
ADQ05591.1
KEGG: ate:Athe_2351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.501
ADQ05592.1
KEGG: ate:Athe_2352 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
       0.501
ADQ05311.1
KEGG: ate:Athe_2090 hypothetical protein.
  
     0.486
ADQ05623.1
PFAM: glycoside hydrolase family 28; KEGG: ate:Athe_2380 galacturan 1,4-alpha-galacturonidase; Belongs to the glycosyl hydrolase 28 family.
  
     0.484
ADQ03729.1
Glycoside hydrolase family 43; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate-binding CenC domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV.
  
     0.475
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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