Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ05605.1KEGG: csc:Csac_0365 hypothetical protein. (287 aa)    
Predicted Functional Partners:
ADQ05606.1
PFAM: ABC-type uncharacterised transport system; KEGG: csc:Csac_0364 hypothetical protein.
  
 0.994
ADQ05604.1
KEGG: csc:Csac_0366 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.983
ADQ05607.1
KEGG: ate:Athe_2369 hypothetical protein.
 
    0.931
ADQ04995.1
KEGG: csc:Csac_2246 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.672
ADQ05588.1
KEGG: ate:Athe_2348 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.650
ADQ05691.1
KEGG: csc:Csac_0515 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.614
ADQ03639.1
KEGG: ate:Athe_0047 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
 
 0.603
ADQ03780.1
KEGG: dth:DICTH_1544 putative ABC-transporter TycD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
  
 
 0.603
ADQ05591.1
KEGG: ate:Athe_2351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.603
ADQ05603.1
KEGG: ate:Athe_2365 hypothetical protein.
       0.455
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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