STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05618.1Hypothetical protein; KEGG: ate:Athe_2013 transposase mutator type. (111 aa)    
Predicted Functional Partners:
ADQ04458.1
PFAM: OmpA/MotB domain protein; KEGG: ate:Athe_1073 OmpA/MotB domain protein.
   
   0.789
ADQ03870.1
KEGG: ate:Athe_0435 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
  
   0.787
ADQ04004.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: tte:TTE1047 STAS domain-containing protein.
  
   0.787
ADQ04005.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: tte:TTE1048 STAS domain-containing protein.
  
   0.787
ADQ04970.1
KEGG: ate:Athe_1682 anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
  
   0.787
ADQ05617.1
PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_0358 ABC-type sugar transport system periplasmic component-like protein.
       0.561
ADQ05619.1
KEGG: tit:Thit_1727 pectate disaccharide-lyase; PFAM: S-layer domain-containing protein; Ig domain protein.
     
 0.446
ADQ05616.1
PFAM: glycoside hydrolase family 43; KEGG: csc:Csac_0359 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 43 family.
       0.412
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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