Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ05646.1KEGG: ate:Athe_2403 protein of unknown function DUF1021; manually curated; PFAM: protein of unknown function DUF1021. (90 aa)    
Predicted Functional Partners:
ADQ04744.1
Transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; KEGG: ate:Athe_1407 transcriptional regulator, DeoR family.
  
     0.573
ADQ05645.1
KEGG: ate:Athe_2402 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
       0.553
ADQ04291.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
   
    0.506
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
     0.455
ADQ05643.1
KEGG: ate:Athe_2400 purine operon repressor, PurR; TIGRFAM: pur operon repressor; PFAM: purine repressor; phosphoribosyltransferase.
 
     0.407
ADQ04500.1
PFAM: protein of unknown function DUF464; KEGG: csc:Csac_1569 hypothetical protein.
  
     0.404
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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