Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ05653.1PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ate:Athe_2559 hypothetical protein. (151 aa)    
Predicted Functional Partners:
ADQ05652.1
KEGG: csc:Csac_0293 hypothetical protein.
 
     0.817
ADQ04670.1
PFAM: carboxyl transferase; KEGG: ate:Athe_1316 carboxyl transferase.
 
  
 0.775
ADQ04901.1
KEGG: csc:Csac_0666 hypothetical protein.
  
     0.571
ADQ04145.1
PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein; KEGG: ate:Athe_0704 transketolase central region.
  
  
 0.485
ADQ05519.1
PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: csc:Csac_2483 biotin/lipoyl attachment domain-containing protein.
  
  
 0.464
ADQ05654.1
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ate:Athe_2560 ATPase associated with various cellular activities AAA_3.
       0.435
rplM
Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
    
   0.419
ADQ05012.1
KEGG: ate:Athe_1723 hypothetical protein.
    
   0.410
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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