STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05663.1KEGG: ate:Athe_2579 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain. (577 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.962
ADQ05660.1
KEGG: ate:Athe_2576 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 0.956
ADQ04066.1
TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; glycoside hydrolase starch-binding; KEGG: ate:Athe_0609 pullulanase, type I; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
0.948
ADQ03883.1
TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: ate:Athe_0448 pullulanase, type I; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
 
 
0.945
ADQ03995.1
Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
 
 0.942
ADQ03709.1
KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain.
 
 
0.938
ADQ03770.1
PFAM: glycoside hydrolase 15-related; KEGG: ate:Athe_0228 glycoside hydrolase 15-related.
    
 0.910
ADQ03895.1
KEGG: fjo:Fjoh_1948 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; Domain of unknown function DUF1939; SMART: alpha amylase catalytic sub domain.
  
  
 
0.909
ADQ05661.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_0428 binding-protein-dependent transport systems inner membrane component.
 
  
 0.862
ADQ05658.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_2574 extracellular solute-binding protein family 1.
 
  
 0.845
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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