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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05668.1PFAM: nucleoside recognition domain protein; KEGG: ate:Athe_2584 nucleoside recognition domain protein. (189 aa)    
Predicted Functional Partners:
ADQ05667.1
PFAM: nucleoside recognition domain protein; KEGG: ate:Athe_2583 nucleoside recognition domain protein.
  
 0.999
ADQ05675.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.693
ADQ04347.1
TIGRFAM: stage III sporulation protein AD; KEGG: ate:Athe_0993 hypothetical protein.
  
  
 0.670
ADQ04344.1
SMART: AAA ATPase; KEGG: ate:Athe_0990 AAA ATPase.
  
  
 0.648
ADQ04894.1
KEGG: ate:Athe_1559 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein.
 
  
 0.590
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.583
ADQ05078.1
KEGG: ate:Athe_1789 stage II sporulation protein P; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.
  
   
 0.577
ADQ05222.1
PFAM: Sporulation stage II protein R; KEGG: ate:Athe_1953 hypothetical protein.
  
   
 0.553
ADQ04346.1
TIGRFAM: stage III sporulation protein AC; KEGG: ate:Athe_0992 stage III sporulation protein AC.
  
  
 0.511
ADQ04691.1
Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
  
   
 0.507
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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