Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ05669.1PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2585 oxidoreductase domain protein. (368 aa)    
Predicted Functional Partners:
ADQ05307.1
PFAM: oxidoreductase domain protein; KEGG: ate:Athe_2082 oxidoreductase domain protein.
  
     0.728
ADQ05573.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ate:Athe_2333 xylose isomerase domain protein TIM barrel.
 
  
 0.727
ADQ05575.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: csc:Csac_0598 xylose isomerase domain-containing protein.
 
  
 0.674
ADQ04493.1
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_1104 glycoside hydrolase family 4.
  
     0.616
ADQ05299.1
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_1104 glycoside hydrolase family 4.
  
     0.615
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 
 0.567
ADQ05670.1
KEGG: ate:Athe_2589 histidine kinase.
   
 
 0.543
lysS
KEGG: ate:Athe_0659 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.538
ADQ03829.1
PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; KEGG: ate:Athe_0345 xylose isomerase domain protein TIM barrel.
 
  
 0.537
ADQ05667.1
PFAM: nucleoside recognition domain protein; KEGG: ate:Athe_2583 nucleoside recognition domain protein.
       0.499
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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