STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05670.1KEGG: ate:Athe_2589 histidine kinase. (90 aa)    
Predicted Functional Partners:
ADQ04145.1
PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein; KEGG: ate:Athe_0704 transketolase central region.
   
 0.907
ADQ04143.1
PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; E3 binding domain protein; biotin/lipoyl attachment domain-containing protein; KEGG: ate:Athe_0702 catalytic domain of components of various dehydrogenase complexes.
    
 0.828
ADQ05444.1
KEGG: ate:Athe_2233 hypothetical protein.
   
 
 0.753
ADQ03886.1
KEGG: ate:Athe_0450 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.749
ADQ03911.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: monosacharide ABC transporter periplasmic monosacharide-binding protein.
    
 
 0.714
ADQ05474.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
    
 
 0.714
ADQ05040.1
KEGG: ate:Athe_1751 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
  
 
 0.704
ADQ03657.1
KEGG: ate:Athe_0080 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
  
 
 0.687
ADQ03796.1
Two component transcriptional regulator, winged helix family; KEGG: amt:Amet_3209 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver.
  
 
 0.687
ADQ04029.1
KEGG: csc:Csac_0817 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.687
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.