STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05674.1KEGG: ate:Athe_2600 hypothetical protein. (879 aa)    
Predicted Functional Partners:
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
 
     0.773
ADQ03873.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
     0.772
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.771
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.770
ADQ04595.1
KEGG: ate:Athe_1241 hypothetical protein.
 
     0.769
ADQ05129.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1839 S-layer domain protein.
  
     0.762
ADQ05516.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2303 S-layer domain protein.
  
     0.759
ADQ04291.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
  
     0.754
ADQ04160.1
KEGG: ate:Athe_0715 hypothetical protein.
  
     0.752
ADQ05581.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2341 S-layer domain protein.
  
     0.752
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.