STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05676.1KEGG: ate:Athe_2603 regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB. (72 aa)    
Predicted Functional Partners:
ADQ04494.1
PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1563 GCN5-related N-acetyltransferase.
 
     0.697
ADQ04171.1
PFAM: protein of unknown function DUF402; KEGG: ate:Athe_0748 protein of unknown function DUF402.
  
     0.675
ADQ04853.1
KEGG: ate:Athe_1520 hypothetical protein.
  
     0.629
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.547
ADQ05675.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
       0.506
ADQ03983.1
KEGG: ate:Athe_0542 hypothetical protein.
  
     0.500
ADQ05677.1
KEGG: ate:Athe_2605 hypothetical protein.
       0.500
ADQ04677.1
PFAM: HutP family protein; KEGG: ate:Athe_1323 HutP family protein.
  
     0.474
ADQ05747.1
PFAM: Colicin V production protein; KEGG: ate:Athe_2747 hypothetical protein.
  
     0.473
ADQ05235.1
PFAM: Coat F domain protein; KEGG: ate:Athe_1976 coat F domain protein.
  
     0.463
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.