STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05691.1KEGG: csc:Csac_0515 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (321 aa)    
Predicted Functional Partners:
ADQ05693.1
PFAM: ABC-2 type transporter; KEGG: ate:Athe_2625 ABC-2 type transporter.
 
  
 0.940
ADQ05692.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter.
 
  
 0.899
ADQ04996.1
KEGG: csc:Csac_2247 hypothetical protein.
 
 
 0.776
ADQ05587.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_2347 hypothetical protein.
 
 
 0.758
ADQ05605.1
KEGG: csc:Csac_0365 hypothetical protein.
  
 
 0.718
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.633
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.620
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.608
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.589
ADQ04249.1
KEGG: ate:Athe_0826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
   
 0.549
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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