STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05691.1KEGG: csc:Csac_0515 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (321 aa)    
Predicted Functional Partners:
ADQ05693.1
PFAM: ABC-2 type transporter; KEGG: ate:Athe_2625 ABC-2 type transporter.
 
  
 0.937
ADQ05692.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter.
 
  
 0.901
ADQ04996.1
KEGG: csc:Csac_2247 hypothetical protein.
 
 
 0.687
ADQ05587.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_2347 hypothetical protein.
 
 
 0.674
ADQ05605.1
KEGG: csc:Csac_0365 hypothetical protein.
  
 
 0.614
ADQ05592.1
KEGG: ate:Athe_2352 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
  
 0.571
ADQ04249.1
KEGG: ate:Athe_0826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
   
 0.548
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
 
 0.497
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
   0.494
atpH
ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.
   
   0.415
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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