STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05721.1KEGG: ate:Athe_0367 hypothetical protein. (294 aa)    
Predicted Functional Partners:
ADQ04596.1
KEGG: ate:Athe_1242 hypothetical protein.
  
     0.589
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.535
ADQ05692.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter.
  
     0.532
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.526
ADQ03983.1
KEGG: ate:Athe_0542 hypothetical protein.
  
     0.501
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.496
ADQ04282.1
PFAM: cobalt transport protein; KEGG: ate:Athe_0859 cobalt transport protein.
  
     0.485
ADQ03824.1
UvrD/REP helicase; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
  
     0.466
ADQ04160.1
KEGG: ate:Athe_0715 hypothetical protein.
  
     0.464
ADQ04563.1
KEGG: ate:Athe_1209 hypothetical protein.
  
     0.446
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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