Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05734.1KEGG: csc:Csac_0088 hypothetical protein. (132 aa)    
Predicted Functional Partners:
ADQ05714.1
KEGG: drm:Dred_1629 CRISPR-associated RAMP Csm3 family protein; TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324.
 
     0.427
ADQ05735.1
KEGG: ate:Athe_2735 hypothetical protein.
       0.409
ADQ03885.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04002.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04238.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04274.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04432.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04611.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ04770.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
ADQ05221.1
KEGG: ate:Athe_2764 protein of unknown function UPF0236.
  
     0.402
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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