STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05743.1KEGG: ate:Athe_2743 hypothetical protein. (75 aa)    
Predicted Functional Partners:
ADQ05744.1
KEGG: ate:Athe_2744 methyl-accepting chemotaxis sensory transducer; PFAM: histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein.
       0.686
ADQ05742.1
KEGG: csc:Csac_0012 hypothetical protein.
       0.494
ADQ05745.1
PFAM: SCP-like extracellular; KEGG: ate:Athe_2745 allergen V5/TPX-1 family protein.
       0.415
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.