STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ05755.1TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ate:Athe_2755 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family. (280 aa)    
Predicted Functional Partners:
ADQ05752.1
KEGG: ate:Athe_2752 cobyrinic acid ac-diamide synthase.
 
 
 0.941
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.908
ADQ05751.1
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ate:Athe_2751 ParB-like partition protein; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
   
0.746
ADQ04479.1
KEGG: ate:Athe_1094 hypothetical protein.
  
 
 0.689
ADQ04334.1
Manually curated; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: ate:Athe_0980 cell divisionFtsK/SpoIIIE; SMART: AAA ATPase.
  
  
 0.678
mnmG
Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
  
  
 0.619
mnmE
tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
  
 0.609
ADQ05760.1
Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein.
 
    0.542
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.522
ADQ05759.1
KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein.
  
  
 0.500
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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