STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_01090Hypothetical protein. (137 aa)    
Predicted Functional Partners:
ROP_01110
Putative hydrolase.
       0.776
ROP_01100
Putative gluconate 5-dehydrogenase; Protein synonym:5-keto-D-gluconate 5-reductase.
       0.773
ROP_01080
Putative acid--CoA ligase.
       0.636
eutC
Ethanolamine ammonia-lyase small subunit; Belongs to the EutC family.
  
  
 0.567
ROP_01070
Putative oxidoreductase.
       0.522
ROP_01120
Zinc-containing alcohol dehydrogenase.
       0.513
ROP_01130
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.509
ROP_01060
Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family.
       0.499
ROP_01030
Putative flavin-containing amine oxidase; Fragment.
       0.487
ROP_01040
Putative flavin-containing amine oxidase; Fragment.
       0.487
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.