Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_02680 | ROP_02690 | ROP_02680 | ROP_02690 | Hypothetical protein. | Hypothetical protein. | 0.770 |
ROP_02680 | ROP_02700 | ROP_02680 | ROP_02700 | Hypothetical protein. | Hypothetical membrane protein. | 0.468 |
ROP_02690 | ROP_02680 | ROP_02690 | ROP_02680 | Hypothetical protein. | Hypothetical protein. | 0.770 |
ROP_02690 | ROP_02700 | ROP_02690 | ROP_02700 | Hypothetical protein. | Hypothetical membrane protein. | 0.459 |
ROP_02700 | ROP_02680 | ROP_02700 | ROP_02680 | Hypothetical membrane protein. | Hypothetical protein. | 0.468 |
ROP_02700 | ROP_02690 | ROP_02700 | ROP_02690 | Hypothetical membrane protein. | Hypothetical protein. | 0.459 |
ROP_02700 | ROP_20240 | ROP_02700 | ROP_20240 | Hypothetical membrane protein. | Putative MarR family transcriptional regulator. | 0.580 |
ROP_02700 | ROP_39330 | ROP_02700 | ROP_39330 | Hypothetical membrane protein. | Hypothetical protein. | 0.515 |
ROP_02700 | ROP_39340 | ROP_02700 | ROP_39340 | Hypothetical membrane protein. | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | 0.677 |
ROP_02700 | ROP_39480 | ROP_02700 | ROP_39480 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.601 |
ROP_02700 | ROP_39720 | ROP_02700 | ROP_39720 | Hypothetical membrane protein. | Glycosyltransferase. | 0.481 |
ROP_02700 | ROP_48100 | ROP_02700 | ROP_48100 | Hypothetical membrane protein. | Putative formyltransferase. | 0.524 |
ROP_02700 | ROP_53300 | ROP_02700 | ROP_53300 | Hypothetical membrane protein. | Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.494 |
ROP_02700 | gpgS | ROP_02700 | ROP_60290 | Hypothetical membrane protein. | Putative glucosyl-3-phosphoglycerate synthase. | 0.473 |
ROP_20240 | ROP_02700 | ROP_20240 | ROP_02700 | Putative MarR family transcriptional regulator. | Hypothetical membrane protein. | 0.580 |
ROP_39330 | ROP_02700 | ROP_39330 | ROP_02700 | Hypothetical protein. | Hypothetical membrane protein. | 0.515 |
ROP_39330 | ROP_39340 | ROP_39330 | ROP_39340 | Hypothetical protein. | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | 0.973 |
ROP_39330 | ROP_39720 | ROP_39330 | ROP_39720 | Hypothetical protein. | Glycosyltransferase. | 0.448 |
ROP_39340 | ROP_02700 | ROP_39340 | ROP_02700 | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | Hypothetical membrane protein. | 0.677 |
ROP_39340 | ROP_39330 | ROP_39340 | ROP_39330 | Hypothetical membrane protein; Belongs to the UbiA prenyltransferase family. | Hypothetical protein. | 0.973 |
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