Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROP_03380Hypothetical protein; Belongs to the UPF0337 (CsbD) family. (64 aa)    
Predicted Functional Partners:
ROP_03400
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.577
ROP_03390
Putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.539
ROP_51730
Hypothetical protein.
  
    0.535
ROP_51200
Hypothetical protein.
 
    0.513
ROP_26470
Hypothetical membrane protein.
  
     0.499
ROP_39770
Putative ABC transporter ATP-binding protein.
  
    0.483
osmC
Putative hydroperoxide peroxidase OsmC; Protein synonym:osmotically inducible protein C.
  
  
 0.481
ohr
Putative organic hydroperoxide resistance protein.
  
  
 0.481
ROP_70210
Hypothetical protein.
  
  
 0.481
ROP_02210
Hypothetical membrane protein.
  
  
 0.476
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.