Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ROP_03420Hypothetical protein. (152 aa)    
Predicted Functional Partners:
ROP_03430
Hypothetical membrane protein.
 
     0.954
ROP_05500
Putative CdaR family transcriptional regulator.
  
     0.611
ROP_03440
Putative oxidoreductase.
       0.533
ROP_67830
Hypothetical protein.
  
     0.432
ROP_60110
Hypothetical protein.
  
     0.421
ROP_13080
Putative ferredoxin.
  
     0.403
ROP_13090
Putative oxidoreductase; Fragment.
  
     0.402
ROP_51410
Putative carbonic anhydrase.
  
     0.402
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.