STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_04370Putative cation-transporting ATPase. (736 aa)    
Predicted Functional Partners:
copZ
Putative copper chaperone CopZ.
  
 
 0.870
ROP_04380
Hypothetical protein.
  
  
 0.860
ROP_04390
Hypothetical protein.
  
  
 0.572
ROP_20910
Putative oxidase.
 
  
 0.522
ROP_52250
Hypothetical protein.
 
   
 0.516
ROP_54640
Putative ArsR family transcriptional regulator.
 
  
 0.497
ROP_29850
Putative ABC transporter ATP-binding protein.
 
 
 0.493
ribG
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.487
ROP_33320
Hypothetical protein.
  
  
 0.482
ROP_48820
Putative ABC transporter ATP-binding protein.
 
 
 0.481
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.