STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_05050Putative ABC transporter ATP-binding protein. (528 aa)    
Predicted Functional Partners:
ROP_05040
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
ROP_05060
Hypothetical protein.
  
 0.990
ROP_21230
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.979
ROP_21250
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.979
ROP_31040
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.979
ROP_21260
Putative ABC transporter substrate-binding protein.
 
 0.977
ROP_31030
Putative ABC transporter ATP-binding/permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.965
ROP_21240
Putative ABC transporter ATP-binding protein.
  
  
 
0.916
ROP_31020
Hypothetical protein.
  
 0.915
ROP_05210
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.780
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.