STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idhMyo-inositol 2-dehydrogenase. (330 aa)    
Predicted Functional Partners:
ROP_05180
Putative inositol catabolism protein.
 
 
 0.986
iolE
Protein synonym:inosose dehydratase.
 
 
 0.985
ROP_10800
Putative inositol catabolism protein.
 
 
 0.982
ROP_05090
Putative 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.924
impA
Putative inositol monophosphatase ImpA; Protein synonym:inositol-phosphate phosphatase.
    
 0.913
suhB
Inositol monophosphatase SuhB; Protein synonym:inositol-phosphate phosphatase; Belongs to the inositol monophosphatase superfamily.
    
 0.912
ROP_05110
Putative oxidoreductase.
 
     0.910
iolB
5-deoxy-glucuronate isomerase.
 
  
 0.878
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.876
iolC
Putative 5-dehydro-2-deoxygluconokinase.
 
  
 0.830
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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