STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_05680Hypothetical protein. (137 aa)    
Predicted Functional Partners:
hmuO
Putative heme oxygenase.
     
  0.900
cobL
Protein synonym:precorrin-6Y methylase.
 
     0.856
ROP_05670
Putative oxidoreductase.
  
    0.852
cobK
Protein synonym:precorrin-6A reductase.
 
     0.776
cobM
Precorrin-4 C11-methyltransferase.
       0.725
ROP_07950
Hypothetical protein.
 
   
 0.580
ROP_40870
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
    0.533
ROP_23940
Hypothetical protein.
 
   
 0.530
ROP_54990
Hypothetical protein.
 
   
 0.496
ROP_47760
Hypothetical protein.
 
   
 0.488
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.