Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_06380 | ROP_06390 | ROP_06380 | ROP_06390 | Putative MerR family transcriptional regulator. | Hypothetical protein. | 0.853 |
ROP_06380 | ROP_06400 | ROP_06380 | ROP_06400 | Putative MerR family transcriptional regulator. | Putative MerR family transcriptional regulator. | 0.744 |
ROP_06380 | garA | ROP_06380 | ROP_06410 | Putative MerR family transcriptional regulator. | Putative signal transduction protein GarA. | 0.670 |
ROP_06390 | ROP_06380 | ROP_06390 | ROP_06380 | Hypothetical protein. | Putative MerR family transcriptional regulator. | 0.853 |
ROP_06390 | ROP_06400 | ROP_06390 | ROP_06400 | Hypothetical protein. | Putative MerR family transcriptional regulator. | 0.736 |
ROP_06390 | ROP_06430 | ROP_06390 | ROP_06430 | Hypothetical protein. | Hypothetical membrane protein. | 0.721 |
ROP_06390 | ROP_06450 | ROP_06390 | ROP_06450 | Hypothetical protein. | Hypothetical membrane protein. | 0.645 |
ROP_06390 | arc | ROP_06390 | ROP_05870 | Hypothetical protein. | ATPase ARC; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.634 |
ROP_06390 | efp | ROP_06390 | ROP_69260 | Hypothetical protein. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.410 |
ROP_06390 | garA | ROP_06390 | ROP_06410 | Hypothetical protein. | Putative signal transduction protein GarA. | 0.636 |
ROP_06390 | pgsA | ROP_06390 | ROP_67400 | Hypothetical protein. | Phosphatidylglycerophosphate synthase; Protein synonym:CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.484 |
ROP_06400 | ROP_06380 | ROP_06400 | ROP_06380 | Putative MerR family transcriptional regulator. | Putative MerR family transcriptional regulator. | 0.744 |
ROP_06400 | ROP_06390 | ROP_06400 | ROP_06390 | Putative MerR family transcriptional regulator. | Hypothetical protein. | 0.736 |
ROP_06400 | ROP_06430 | ROP_06400 | ROP_06430 | Putative MerR family transcriptional regulator. | Hypothetical membrane protein. | 0.518 |
ROP_06400 | ROP_06450 | ROP_06400 | ROP_06450 | Putative MerR family transcriptional regulator. | Hypothetical membrane protein. | 0.483 |
ROP_06400 | garA | ROP_06400 | ROP_06410 | Putative MerR family transcriptional regulator. | Putative signal transduction protein GarA. | 0.863 |
ROP_06430 | ROP_06390 | ROP_06430 | ROP_06390 | Hypothetical membrane protein. | Hypothetical protein. | 0.721 |
ROP_06430 | ROP_06400 | ROP_06430 | ROP_06400 | Hypothetical membrane protein. | Putative MerR family transcriptional regulator. | 0.518 |
ROP_06430 | ROP_06450 | ROP_06430 | ROP_06450 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.970 |
ROP_06430 | garA | ROP_06430 | ROP_06410 | Hypothetical membrane protein. | Putative signal transduction protein GarA. | 0.433 |
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