Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_09750 | cysD | ROP_09750 | ROP_09730 | Putative ferrochelatase. | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | 0.939 |
ROP_09750 | cysH | ROP_09750 | ROP_09720 | Putative ferrochelatase. | Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.984 |
ROP_09750 | cysN | ROP_09750 | ROP_09740 | Putative ferrochelatase. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.915 |
ROP_09750 | cysNC | ROP_09750 | ROP_09870 | Putative ferrochelatase. | Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.509 |
ROP_09750 | cysNC-2 | ROP_09750 | ROP_12230 | Putative ferrochelatase. | Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.509 |
ROP_09750 | sirA | ROP_09750 | ROP_09710 | Putative ferrochelatase. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.985 |
ROP_34600 | cysD | ROP_34600 | ROP_09730 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | 0.647 |
ROP_34600 | cysH | ROP_34600 | ROP_09720 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.963 |
ROP_34600 | cysJ | ROP_34600 | ROP_14710 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative NADPH--sulfite reductase flavoprotein alpha-component. | 0.925 |
ROP_34600 | cysN | ROP_34600 | ROP_09740 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.695 |
ROP_34600 | cysNC | ROP_34600 | ROP_09870 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.966 |
ROP_34600 | cysNC-2 | ROP_34600 | ROP_12230 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.966 |
ROP_34600 | metB | ROP_34600 | ROP_59060 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Cystathionine gamma-synthase/cystathionine gamma-lyase; Bifunctional protein. | 0.941 |
ROP_34600 | metZ | ROP_34600 | ROP_19520 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. | 0.941 |
ROP_34600 | sirA | ROP_34600 | ROP_09710 | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.989 |
cysD | ROP_09750 | ROP_09730 | ROP_09750 | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | Putative ferrochelatase. | 0.939 |
cysD | ROP_34600 | ROP_09730 | ROP_34600 | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | Putative nitrate/sulfite reductase; Bifunctional protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.647 |
cysD | cysH | ROP_09730 | ROP_09720 | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.988 |
cysD | cysJ | ROP_09730 | ROP_14710 | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | Putative NADPH--sulfite reductase flavoprotein alpha-component. | 0.536 |
cysD | cysN | ROP_09730 | ROP_09740 | Sulfate adenylyltransferase subunit 2; Protein synonym:ATP sulfurylase small subunit. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.999 |
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