Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ROP_12040 | ROP_12050 | Putative oxidoreductase. | Putative oxidoreductase. | 0.824 |
ROP_12040 | ROP_12060 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.773 |
ROP_12040 | ROP_12070 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.804 |
ROP_12040 | ROP_12080 | Putative oxidoreductase. | Putative phosphotransferase. | 0.778 |
ROP_12040 | ROP_12090 | Putative oxidoreductase. | Oxidoreductase. | 0.708 |
ROP_12040 | ROP_12100 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.797 |
ROP_12040 | ROP_46560 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.455 |
ROP_12050 | ROP_12040 | Putative oxidoreductase. | Putative oxidoreductase. | 0.824 |
ROP_12050 | ROP_12060 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.725 |
ROP_12050 | ROP_12070 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.725 |
ROP_12050 | ROP_12080 | Putative oxidoreductase. | Putative phosphotransferase. | 0.793 |
ROP_12050 | ROP_12090 | Putative oxidoreductase. | Oxidoreductase. | 0.731 |
ROP_12050 | ROP_12100 | Putative oxidoreductase. | Putative acyl-CoA dehydrogenase. | 0.787 |
ROP_12060 | ROP_12040 | Putative acyl-CoA dehydrogenase. | Putative oxidoreductase. | 0.773 |
ROP_12060 | ROP_12050 | Putative acyl-CoA dehydrogenase. | Putative oxidoreductase. | 0.725 |
ROP_12060 | ROP_12070 | Putative acyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.951 |
ROP_12060 | ROP_12080 | Putative acyl-CoA dehydrogenase. | Putative phosphotransferase. | 0.834 |
ROP_12060 | ROP_12090 | Putative acyl-CoA dehydrogenase. | Oxidoreductase. | 0.845 |
ROP_12060 | ROP_12100 | Putative acyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.811 |
ROP_12060 | ROP_24640 | Putative acyl-CoA dehydrogenase. | Putative acyl-CoA dehydrogenase. | 0.717 |
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