Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_12430 | echA | ROP_12430 | ROP_12410 | enoyl-CoA hydratase/isomerase family protein. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.888 |
ROP_12430 | fadB | ROP_12430 | ROP_25300 | enoyl-CoA hydratase/isomerase family protein. | Fatty oxidation complex alpha subunit; Multifunctional protein. | 0.772 |
ROP_12430 | fadB-3 | ROP_12430 | ROP_41320 | enoyl-CoA hydratase/isomerase family protein. | Fatty oxidation complex alpha subunit; Multifunctional protein. | 0.772 |
ROP_12430 | mmsA | ROP_12430 | ROP_05260 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
ROP_12430 | mmsA-2 | ROP_12430 | ROP_10730 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
ROP_12430 | mmsA-3 | ROP_12430 | ROP_12450 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.932 |
ROP_12430 | mmsA-4 | ROP_12430 | ROP_43860 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
ROP_12430 | mmsA-5 | ROP_12430 | ROP_44630 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
ROP_12430 | mmsA-6 | ROP_12430 | ROP_72060 | enoyl-CoA hydratase/isomerase family protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
ROP_12430 | mmsB | ROP_12430 | ROP_12420 | enoyl-CoA hydratase/isomerase family protein. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.978 |
echA | ROP_12430 | ROP_12410 | ROP_12430 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | enoyl-CoA hydratase/isomerase family protein. | 0.888 |
echA | fadB | ROP_12410 | ROP_25300 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex alpha subunit; Multifunctional protein. | 0.772 |
echA | fadB-3 | ROP_12410 | ROP_41320 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty oxidation complex alpha subunit; Multifunctional protein. | 0.772 |
echA | mmsA | ROP_12410 | ROP_05260 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
echA | mmsA-2 | ROP_12410 | ROP_10730 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
echA | mmsA-3 | ROP_12410 | ROP_12450 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.873 |
echA | mmsA-4 | ROP_12410 | ROP_43860 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
echA | mmsA-5 | ROP_12410 | ROP_44630 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
echA | mmsA-6 | ROP_12410 | ROP_72060 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Methylmalonate-semialdehyde dehydrogenase. | 0.612 |
echA | mmsB | ROP_12410 | ROP_12420 | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.927 |
page 1 of 6