Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_13320 | ROP_13330 | ROP_13320 | ROP_13330 | Putative CdaR family transcriptional regulator. | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | 0.618 |
ROP_13320 | ROP_13340 | ROP_13320 | ROP_13340 | Putative CdaR family transcriptional regulator. | Hypothetical protein. | 0.558 |
ROP_13330 | ROP_13320 | ROP_13330 | ROP_13320 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Putative CdaR family transcriptional regulator. | 0.618 |
ROP_13330 | ROP_13340 | ROP_13330 | ROP_13340 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.801 |
ROP_13330 | ROP_13350 | ROP_13330 | ROP_13350 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Hypothetical protein. | 0.497 |
ROP_13330 | ROP_44280 | ROP_13330 | ROP_44280 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Putative hydrolase. | 0.442 |
ROP_13330 | carA | ROP_13330 | ROP_69320 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Protein synonym:carbamoyl-phosphate synthetase glutamine chain; Belongs to the CarA family. | 0.434 |
ROP_13330 | carB | ROP_13330 | ROP_69330 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Protein synonym:carbamoyl-phosphate synthetase ammonia chain; Belongs to the CarB family. | 0.438 |
ROP_13330 | guaD | ROP_13330 | ROP_36860 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Guanine deaminase. | 0.442 |
ROP_13330 | pyrB | ROP_13330 | ROP_69290 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Protein synonym:aspartate transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.452 |
ROP_13330 | thiD | ROP_13330 | ROP_18980 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Protein synonym:HMP-phosphate kinase. | 0.448 |
ROP_13330 | thiE | ROP_13330 | ROP_19060 | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.434 |
ROP_13340 | ROP_13320 | ROP_13340 | ROP_13320 | Hypothetical protein. | Putative CdaR family transcriptional regulator. | 0.558 |
ROP_13340 | ROP_13330 | ROP_13340 | ROP_13330 | Hypothetical protein. | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | 0.801 |
ROP_13340 | ROP_13350 | ROP_13340 | ROP_13350 | Hypothetical protein. | Hypothetical protein. | 0.497 |
ROP_13350 | ROP_13330 | ROP_13350 | ROP_13330 | Hypothetical protein. | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | 0.497 |
ROP_13350 | ROP_13340 | ROP_13350 | ROP_13340 | Hypothetical protein. | Hypothetical protein. | 0.497 |
ROP_44280 | ROP_13330 | ROP_44280 | ROP_13330 | Putative hydrolase. | Putative NCS1 family transporter; Belongs to the purine-cytosine permease (2.A.39) family. | 0.442 |
ROP_44280 | carB | ROP_44280 | ROP_69330 | Putative hydrolase. | Protein synonym:carbamoyl-phosphate synthetase ammonia chain; Belongs to the CarB family. | 0.433 |
ROP_44280 | pyrB | ROP_44280 | ROP_69290 | Putative hydrolase. | Protein synonym:aspartate transcarbamylase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.400 |
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