STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_14300Hypothetical protein. (169 aa)    
Predicted Functional Partners:
ROP_14400
Putative FMNH2-dependent monooxygenase.
 
 0.958
ssuD
Alkanesulfonate monooxygenase.
 
 0.954
ROP_50210
Putative ABC transporter substrate-binding protein.
 
 
 0.954
ROP_21470
Putative FMNH2-dependent dimethyl sulfone monooxygenase.
 
 0.947
ROP_22040
Putative dioxygenase.
 
 
  0.941
ssuB
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 
 0.934
ROP_50220
Putative ABC transporter permease protein.
  
 
  0.933
ROP_38600
Putative dioxygenase.
 
 
  0.931
cysH
Adenosine 5'-phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
 
 0.930
ROP_36380
Putative dioxygenase.
  
 
  0.918
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.