Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_08420 | ROP_14790 | ROP_08420 | ROP_14790 | Mannosyltransferase. | Hypothetical membrane protein. | 0.551 |
ROP_14620 | ROP_14790 | ROP_14620 | ROP_14790 | Putative TetR family transcriptional regulator. | Hypothetical membrane protein. | 0.465 |
ROP_14780 | ROP_14790 | ROP_14780 | ROP_14790 | Hypothetical protein. | Hypothetical membrane protein. | 0.709 |
ROP_14780 | ROP_14800 | ROP_14780 | ROP_14800 | Hypothetical protein. | Hypothetical protein. | 0.432 |
ROP_14780 | ROP_14810 | ROP_14780 | ROP_14810 | Hypothetical protein. | Hypothetical protein. | 0.432 |
ROP_14790 | ROP_08420 | ROP_14790 | ROP_08420 | Hypothetical membrane protein. | Mannosyltransferase. | 0.551 |
ROP_14790 | ROP_14620 | ROP_14790 | ROP_14620 | Hypothetical membrane protein. | Putative TetR family transcriptional regulator. | 0.465 |
ROP_14790 | ROP_14780 | ROP_14790 | ROP_14780 | Hypothetical membrane protein. | Hypothetical protein. | 0.709 |
ROP_14790 | ROP_14800 | ROP_14790 | ROP_14800 | Hypothetical membrane protein. | Hypothetical protein. | 0.492 |
ROP_14790 | ROP_14810 | ROP_14790 | ROP_14810 | Hypothetical membrane protein. | Hypothetical protein. | 0.492 |
ROP_14790 | ROP_27730 | ROP_14790 | ROP_27730 | Hypothetical membrane protein. | Putative glycosyltransferase. | 0.551 |
ROP_14790 | ROP_35340 | ROP_14790 | ROP_35340 | Hypothetical membrane protein. | Putative TetR family transcriptional regulator. | 0.465 |
ROP_14790 | ROP_47430 | ROP_14790 | ROP_47430 | Hypothetical membrane protein. | Putative glycosyltransferase. | 0.551 |
ROP_14790 | ROP_55520 | ROP_14790 | ROP_55520 | Hypothetical membrane protein. | Hypothetical protein. | 0.554 |
ROP_14790 | lepB | ROP_14790 | ROP_65950 | Hypothetical membrane protein. | Protein synonym:leader peptidase I; Belongs to the peptidase S26 family. | 0.475 |
ROP_14800 | ROP_14780 | ROP_14800 | ROP_14780 | Hypothetical protein. | Hypothetical protein. | 0.432 |
ROP_14800 | ROP_14790 | ROP_14800 | ROP_14790 | Hypothetical protein. | Hypothetical membrane protein. | 0.492 |
ROP_14800 | ROP_14810 | ROP_14800 | ROP_14810 | Hypothetical protein. | Hypothetical protein. | 0.902 |
ROP_14810 | ROP_14780 | ROP_14810 | ROP_14780 | Hypothetical protein. | Hypothetical protein. | 0.432 |
ROP_14810 | ROP_14790 | ROP_14810 | ROP_14790 | Hypothetical protein. | Hypothetical membrane protein. | 0.492 |
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