Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_19850 | ROP_19860 | ROP_19850 | ROP_19860 | Hypothetical protein. | Hypothetical membrane protein. | 0.497 |
ROP_19850 | ROP_19870 | ROP_19850 | ROP_19870 | Hypothetical protein. | Hypothetical membrane protein. | 0.497 |
ROP_19850 | ROP_19880 | ROP_19850 | ROP_19880 | Hypothetical protein. | Putative ABC transporter permease protein. | 0.518 |
ROP_19850 | ROP_19890 | ROP_19850 | ROP_19890 | Hypothetical protein. | Putative ABC transporter ATP-binding protein. | 0.586 |
ROP_19850 | ROP_19900 | ROP_19850 | ROP_19900 | Hypothetical protein. | Hypothetical protein. | 0.431 |
ROP_19860 | ROP_19850 | ROP_19860 | ROP_19850 | Hypothetical membrane protein. | Hypothetical protein. | 0.497 |
ROP_19860 | ROP_19870 | ROP_19860 | ROP_19870 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.993 |
ROP_19860 | ROP_19880 | ROP_19860 | ROP_19880 | Hypothetical membrane protein. | Putative ABC transporter permease protein. | 0.999 |
ROP_19860 | ROP_19890 | ROP_19860 | ROP_19890 | Hypothetical membrane protein. | Putative ABC transporter ATP-binding protein. | 0.997 |
ROP_19860 | ROP_19900 | ROP_19860 | ROP_19900 | Hypothetical membrane protein. | Hypothetical protein. | 0.614 |
ROP_19860 | ROP_53040 | ROP_19860 | ROP_53040 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.822 |
ROP_19860 | cobIJ | ROP_19860 | ROP_02940 | Hypothetical membrane protein. | Precorrin-2 C(20)-methyltransferase/precorrin-3B C(17)-methyltransferase; Bifunctional protein; protein synonym:cobalamin biosynthesis protein CobIJ; Belongs to the precorrin methyltransferase family. | 0.647 |
ROP_19870 | ROP_19850 | ROP_19870 | ROP_19850 | Hypothetical membrane protein. | Hypothetical protein. | 0.497 |
ROP_19870 | ROP_19860 | ROP_19870 | ROP_19860 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.993 |
ROP_19870 | ROP_19880 | ROP_19870 | ROP_19880 | Hypothetical membrane protein. | Putative ABC transporter permease protein. | 0.999 |
ROP_19870 | ROP_19890 | ROP_19870 | ROP_19890 | Hypothetical membrane protein. | Putative ABC transporter ATP-binding protein. | 0.996 |
ROP_19870 | ROP_19900 | ROP_19870 | ROP_19900 | Hypothetical membrane protein. | Hypothetical protein. | 0.614 |
ROP_19870 | ROP_53040 | ROP_19870 | ROP_53040 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.822 |
ROP_19870 | cobIJ | ROP_19870 | ROP_02940 | Hypothetical membrane protein. | Precorrin-2 C(20)-methyltransferase/precorrin-3B C(17)-methyltransferase; Bifunctional protein; protein synonym:cobalamin biosynthesis protein CobIJ; Belongs to the precorrin methyltransferase family. | 0.647 |
ROP_19880 | ROP_19850 | ROP_19880 | ROP_19850 | Putative ABC transporter permease protein. | Hypothetical protein. | 0.518 |
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