Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ROP_200603-hydroxyacyl-CoA dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (254 aa)    
Predicted Functional Partners:
ROP_20070
Putative acetyl-CoA acyltransferase; Protein synonym:acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.877
ROP_20050
4-coumarate--CoA ligase.
  
 
 0.800
echA-2
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.705
ROP_47870
Putative enoyl-CoA hydratase.
  
 0.696
ROP_20200
Putative enoyl-CoA hydratase.
  
 0.695
fas1
Fatty-acid synthase I.
  
 0.694
ROP_17690
Putative enoyl-CoA hydratase.
  
 0.694
ROP_47500
Putative enoyl-CoA hydratase.
  
 0.694
ROP_38190
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.687
ROP_71000
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.687
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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