Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ROP_10760 | ROP_20190 | Hypothetical protein. | Hypothetical protein. | 0.582 |
ROP_13590 | ROP_20190 | Hypothetical protein. | Hypothetical protein. | 0.653 |
ROP_13590 | ROP_21630 | Hypothetical protein. | Hypothetical protein. | 0.529 |
ROP_13590 | ROP_27040 | Hypothetical protein. | Putative CdaR family transcriptional regulator. | 0.587 |
ROP_15970 | ROP_20190 | Hypothetical membrane protein. | Hypothetical protein. | 0.518 |
ROP_18320 | ROP_20190 | Hypothetical membrane protein. | Hypothetical protein. | 0.629 |
ROP_20180 | ROP_20190 | Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase. | Hypothetical protein. | 0.631 |
ROP_20180 | ROP_20200 | Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase. | Putative enoyl-CoA hydratase. | 0.630 |
ROP_20180 | ROP_20210 | Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase. | Fumarylacetoacetase; Protein synonym:fumarylacetoacetate hydrolase. | 0.417 |
ROP_20180 | ROP_20220 | Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase. | Hypothetical protein. | 0.458 |
ROP_20190 | ROP_10760 | Hypothetical protein. | Hypothetical protein. | 0.582 |
ROP_20190 | ROP_13590 | Hypothetical protein. | Hypothetical protein. | 0.653 |
ROP_20190 | ROP_15970 | Hypothetical protein. | Hypothetical membrane protein. | 0.518 |
ROP_20190 | ROP_18320 | Hypothetical protein. | Hypothetical membrane protein. | 0.629 |
ROP_20190 | ROP_20180 | Hypothetical protein. | Putative fatty-acid--CoA ligase; Protein synonym:acyl-CoA synthetase. | 0.631 |
ROP_20190 | ROP_20200 | Hypothetical protein. | Putative enoyl-CoA hydratase. | 0.505 |
ROP_20190 | ROP_20210 | Hypothetical protein. | Fumarylacetoacetase; Protein synonym:fumarylacetoacetate hydrolase. | 0.432 |
ROP_20190 | ROP_20220 | Hypothetical protein. | Hypothetical protein. | 0.432 |
ROP_20190 | ROP_21630 | Hypothetical protein. | Hypothetical protein. | 0.566 |
ROP_20190 | ROP_27040 | Hypothetical protein. | Putative CdaR family transcriptional regulator. | 0.537 |
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