Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_02580 | ROP_02610 | ROP_02580 | ROP_02610 | Non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.993 |
ROP_02580 | ROP_04690 | ROP_02580 | ROP_04690 | Non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.978 |
ROP_02580 | ROP_19210 | ROP_02580 | ROP_19210 | Non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.977 |
ROP_02580 | ROP_19240 | ROP_02580 | ROP_19240 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.978 |
ROP_02580 | ROP_20360 | ROP_02580 | ROP_20360 | Non-ribosomal peptide synthetase. | Isochorismatase; Protein synonym:2,3 dihydro-2,3 dihydroxybenzoate synthase. | 0.993 |
ROP_02580 | ROP_20370 | ROP_02580 | ROP_20370 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.980 |
ROP_02580 | ROP_23240 | ROP_02580 | ROP_23240 | Non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.977 |
ROP_02580 | ROP_24510 | ROP_02580 | ROP_24510 | Non-ribosomal peptide synthetase. | Hypothetical protein. | 0.474 |
ROP_02580 | fas1 | ROP_02580 | ROP_11350 | Non-ribosomal peptide synthetase. | Fatty-acid synthase I. | 0.997 |
ROP_02610 | ROP_02580 | ROP_02610 | ROP_02580 | Putative non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.993 |
ROP_02610 | ROP_04690 | ROP_02610 | ROP_04690 | Putative non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.992 |
ROP_02610 | ROP_19210 | ROP_02610 | ROP_19210 | Putative non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.993 |
ROP_02610 | ROP_19240 | ROP_02610 | ROP_19240 | Putative non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.993 |
ROP_02610 | ROP_20360 | ROP_02610 | ROP_20360 | Putative non-ribosomal peptide synthetase. | Isochorismatase; Protein synonym:2,3 dihydro-2,3 dihydroxybenzoate synthase. | 0.996 |
ROP_02610 | ROP_20370 | ROP_02610 | ROP_20370 | Putative non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.993 |
ROP_02610 | ROP_23240 | ROP_02610 | ROP_23240 | Putative non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.992 |
ROP_02610 | ROP_24510 | ROP_02610 | ROP_24510 | Putative non-ribosomal peptide synthetase. | Hypothetical protein. | 0.475 |
ROP_02610 | fas1 | ROP_02610 | ROP_11350 | Putative non-ribosomal peptide synthetase. | Fatty-acid synthase I. | 0.998 |
ROP_04690 | ROP_02580 | ROP_04690 | ROP_02580 | Putative non-ribosomal peptide synthetase. | Non-ribosomal peptide synthetase. | 0.978 |
ROP_04690 | ROP_02610 | ROP_04690 | ROP_02610 | Putative non-ribosomal peptide synthetase. | Putative non-ribosomal peptide synthetase. | 0.992 |
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