Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_24700 | ROP_24710 | ROP_24700 | ROP_24710 | Putative RpiR family transcriptional regulator; Fragment. | Putative RpiR family transcriptional regulator; Fragment. | 0.773 |
ROP_24700 | ROP_24720 | ROP_24700 | ROP_24720 | Putative RpiR family transcriptional regulator; Fragment. | Putative oxidoreductase. | 0.691 |
ROP_24700 | ROP_24730 | ROP_24700 | ROP_24730 | Putative RpiR family transcriptional regulator; Fragment. | Hypothetical protein. | 0.466 |
ROP_24700 | ROP_36260 | ROP_24700 | ROP_36260 | Putative RpiR family transcriptional regulator; Fragment. | Hypothetical protein. | 0.450 |
ROP_24700 | ROP_41480 | ROP_24700 | ROP_41480 | Putative RpiR family transcriptional regulator; Fragment. | Hypothetical protein. | 0.451 |
ROP_24700 | ROP_59670 | ROP_24700 | ROP_59670 | Putative RpiR family transcriptional regulator; Fragment. | Putative ClC chloride channel. | 0.409 |
ROP_24700 | ROP_67680 | ROP_24700 | ROP_67680 | Putative RpiR family transcriptional regulator; Fragment. | Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase. | 0.470 |
ROP_24700 | manA | ROP_24700 | ROP_63800 | Putative RpiR family transcriptional regulator; Fragment. | Protein synonym:phosphomannose isomerase. | 0.463 |
ROP_24710 | ROP_24700 | ROP_24710 | ROP_24700 | Putative RpiR family transcriptional regulator; Fragment. | Putative RpiR family transcriptional regulator; Fragment. | 0.773 |
ROP_24710 | ROP_24720 | ROP_24710 | ROP_24720 | Putative RpiR family transcriptional regulator; Fragment. | Putative oxidoreductase. | 0.691 |
ROP_24710 | ROP_24730 | ROP_24710 | ROP_24730 | Putative RpiR family transcriptional regulator; Fragment. | Hypothetical protein. | 0.466 |
ROP_24710 | ROP_59670 | ROP_24710 | ROP_59670 | Putative RpiR family transcriptional regulator; Fragment. | Putative ClC chloride channel. | 0.409 |
ROP_24710 | ROP_67680 | ROP_24710 | ROP_67680 | Putative RpiR family transcriptional regulator; Fragment. | Putative fructose-specific phosphotransferase system enzyme II; Protein synonym:PTS fructose-specific EIIABC component; protein synonym:protein-Npi-phosphohistidine--sugar phosphotransferase. | 0.470 |
ROP_24710 | manA | ROP_24710 | ROP_63800 | Putative RpiR family transcriptional regulator; Fragment. | Protein synonym:phosphomannose isomerase. | 0.463 |
ROP_24720 | ROP_24700 | ROP_24720 | ROP_24700 | Putative oxidoreductase. | Putative RpiR family transcriptional regulator; Fragment. | 0.691 |
ROP_24720 | ROP_24710 | ROP_24720 | ROP_24710 | Putative oxidoreductase. | Putative RpiR family transcriptional regulator; Fragment. | 0.691 |
ROP_24720 | ROP_24730 | ROP_24720 | ROP_24730 | Putative oxidoreductase. | Hypothetical protein. | 0.518 |
ROP_24730 | ROP_24700 | ROP_24730 | ROP_24700 | Hypothetical protein. | Putative RpiR family transcriptional regulator; Fragment. | 0.466 |
ROP_24730 | ROP_24710 | ROP_24730 | ROP_24710 | Hypothetical protein. | Putative RpiR family transcriptional regulator; Fragment. | 0.466 |
ROP_24730 | ROP_24720 | ROP_24730 | ROP_24720 | Hypothetical protein. | Putative oxidoreductase. | 0.518 |
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