Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_14630 | ROP_14700 | ROP_14630 | ROP_14700 | Histamine dehydrogenase. | Putative glutamate synthase. | 0.525 |
ROP_14630 | ROP_25400 | ROP_14630 | ROP_25400 | Histamine dehydrogenase. | Hypothetical protein; Belongs to the glutamate synthase family. | 0.911 |
ROP_14630 | ROP_25410 | ROP_14630 | ROP_25410 | Histamine dehydrogenase. | Hypothetical protein. | 0.911 |
ROP_14630 | ROP_25420 | ROP_14630 | ROP_25420 | Histamine dehydrogenase. | Putative glutamine amidotransferase-like protein. | 0.912 |
ROP_14630 | ROP_27330 | ROP_14630 | ROP_27330 | Histamine dehydrogenase. | Putative methylamine dehydrogenase. | 0.932 |
ROP_14700 | ROP_14630 | ROP_14700 | ROP_14630 | Putative glutamate synthase. | Histamine dehydrogenase. | 0.525 |
ROP_14700 | ROP_25400 | ROP_14700 | ROP_25400 | Putative glutamate synthase. | Hypothetical protein; Belongs to the glutamate synthase family. | 0.820 |
ROP_14700 | ROP_25410 | ROP_14700 | ROP_25410 | Putative glutamate synthase. | Hypothetical protein. | 0.822 |
ROP_14700 | ROP_25420 | ROP_14700 | ROP_25420 | Putative glutamate synthase. | Putative glutamine amidotransferase-like protein. | 0.561 |
ROP_14700 | ROP_25430 | ROP_14700 | ROP_25430 | Putative glutamate synthase. | Glutamine synthetase; Protein synonym:glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | 0.883 |
ROP_14700 | ROP_27330 | ROP_14700 | ROP_27330 | Putative glutamate synthase. | Putative methylamine dehydrogenase. | 0.998 |
ROP_14700 | gltD | ROP_14700 | ROP_07340 | Putative glutamate synthase. | Glutamate synthase small subunit. | 0.999 |
ROP_14700 | gltD-2 | ROP_14700 | ROP_35360 | Putative glutamate synthase. | Glutamate synthase small subunit. | 0.999 |
ROP_25400 | ROP_14630 | ROP_25400 | ROP_14630 | Hypothetical protein; Belongs to the glutamate synthase family. | Histamine dehydrogenase. | 0.911 |
ROP_25400 | ROP_14700 | ROP_25400 | ROP_14700 | Hypothetical protein; Belongs to the glutamate synthase family. | Putative glutamate synthase. | 0.820 |
ROP_25400 | ROP_25410 | ROP_25400 | ROP_25410 | Hypothetical protein; Belongs to the glutamate synthase family. | Hypothetical protein. | 0.999 |
ROP_25400 | ROP_25420 | ROP_25400 | ROP_25420 | Hypothetical protein; Belongs to the glutamate synthase family. | Putative glutamine amidotransferase-like protein. | 0.995 |
ROP_25400 | ROP_25430 | ROP_25400 | ROP_25430 | Hypothetical protein; Belongs to the glutamate synthase family. | Glutamine synthetase; Protein synonym:glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | 0.969 |
ROP_25400 | ROP_25480 | ROP_25400 | ROP_25480 | Hypothetical protein; Belongs to the glutamate synthase family. | Hypothetical protein. | 0.842 |
ROP_25400 | ROP_25540 | ROP_25400 | ROP_25540 | Hypothetical protein; Belongs to the glutamate synthase family. | Putative Xre family DNA-binding protein. | 0.828 |
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