Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_18530 | ROP_41490 | ROP_18530 | ROP_41490 | Urea carboxylase. | Putative acyl-CoA carboxylase. | 0.836 |
ROP_18530 | ROP_68910 | ROP_18530 | ROP_68910 | Urea carboxylase. | Putative urea carboxylase. | 0.999 |
ROP_18530 | accA-2 | ROP_18530 | ROP_31190 | Urea carboxylase. | acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein. | 0.413 |
ROP_18530 | accB | ROP_18530 | ROP_29710 | Urea carboxylase. | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.897 |
ROP_18530 | accD-2 | ROP_18530 | ROP_26590 | Urea carboxylase. | Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase. | 0.968 |
ROP_18530 | accD-4 | ROP_18530 | ROP_50730 | Urea carboxylase. | Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase. | 0.968 |
ROP_18530 | fabF | ROP_18530 | ROP_09240 | Urea carboxylase. | Protein synonym:beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.612 |
ROP_18530 | fabI | ROP_18530 | ROP_70020 | Urea carboxylase. | Enoyl-[acyl-carrier-protein] reductase. | 0.475 |
ROP_18530 | fas1 | ROP_18530 | ROP_11350 | Urea carboxylase. | Fatty-acid synthase I. | 0.944 |
ROP_41490 | ROP_18530 | ROP_41490 | ROP_18530 | Putative acyl-CoA carboxylase. | Urea carboxylase. | 0.836 |
ROP_41490 | ROP_68910 | ROP_41490 | ROP_68910 | Putative acyl-CoA carboxylase. | Putative urea carboxylase. | 0.827 |
ROP_41490 | accA-2 | ROP_41490 | ROP_31190 | Putative acyl-CoA carboxylase. | acyl-CoA carboxylase alpha chain; Protein synonym:biotin carboxylase/biotin carboxyl carrier protein. | 0.744 |
ROP_41490 | accB | ROP_41490 | ROP_29710 | Putative acyl-CoA carboxylase. | acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. | 0.862 |
ROP_41490 | accC | ROP_41490 | ROP_29700 | Putative acyl-CoA carboxylase. | acetyl-CoA carboxylase biotin carboxylase subunit. | 0.737 |
ROP_41490 | accD-2 | ROP_41490 | ROP_26590 | Putative acyl-CoA carboxylase. | Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase. | 0.977 |
ROP_41490 | accD-4 | ROP_41490 | ROP_50730 | Putative acyl-CoA carboxylase. | Putative acetyl-CoA carboxylase beta chain; Protein synonym:carboxyltransferase. | 0.977 |
ROP_41490 | fabF | ROP_41490 | ROP_09240 | Putative acyl-CoA carboxylase. | Protein synonym:beta-ketoacyl-ACP synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.634 |
ROP_41490 | fabI | ROP_41490 | ROP_70020 | Putative acyl-CoA carboxylase. | Enoyl-[acyl-carrier-protein] reductase. | 0.527 |
ROP_41490 | fas1 | ROP_41490 | ROP_11350 | Putative acyl-CoA carboxylase. | Fatty-acid synthase I. | 0.989 |
ROP_68910 | ROP_18530 | ROP_68910 | ROP_18530 | Putative urea carboxylase. | Urea carboxylase. | 0.999 |
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