STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_26880Putative MFS transporter. (426 aa)    
Predicted Functional Partners:
ROP_26890
Hypothetical protein.
 
  
 0.905
ROP_26910
enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
     0.809
ROP_26900
Putative CoA-transferase; Belongs to the CoA-transferase III family.
 
     0.805
ROP_26920
Hypothetical protein; Belongs to the DapA family.
 
   
 0.802
ROP_26930
Putative oxidoreductase.
 
     0.749
ROP_26940
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.672
ROP_26870
Putative Xre family DNA-binding protein.
 
  
 0.558
ROP_52640
Putative FMN-dependent dehydrogenase.
  
  
 0.433
ROP_61310
Putative oxidoreductase.
  
  
 0.433
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.