Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_27790 | ROP_27800 | ROP_27790 | ROP_27800 | Hypothetical protein. | Putative toxin. | 0.461 |
ROP_27790 | ROP_27810 | ROP_27790 | ROP_27810 | Hypothetical protein. | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.462 |
ROP_27800 | ROP_27790 | ROP_27800 | ROP_27790 | Putative toxin. | Hypothetical protein. | 0.461 |
ROP_27800 | ROP_27810 | ROP_27800 | ROP_27810 | Putative toxin. | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.999 |
ROP_27800 | ROP_27820 | ROP_27800 | ROP_27820 | Putative toxin. | Hypothetical protein. | 0.541 |
ROP_27800 | ROP_29420 | ROP_27800 | ROP_29420 | Putative toxin. | Hypothetical protein. | 0.482 |
ROP_27800 | ROP_29430 | ROP_27800 | ROP_29430 | Putative toxin. | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.899 |
ROP_27800 | ROP_35890 | ROP_27800 | ROP_35890 | Putative toxin. | Hypothetical protein. | 0.543 |
ROP_27810 | ROP_27790 | ROP_27810 | ROP_27790 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.462 |
ROP_27810 | ROP_27800 | ROP_27810 | ROP_27800 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Putative toxin. | 0.999 |
ROP_27810 | ROP_27820 | ROP_27810 | ROP_27820 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.541 |
ROP_27810 | ROP_29420 | ROP_27810 | ROP_29420 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.889 |
ROP_27810 | ROP_29430 | ROP_27810 | ROP_29430 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.451 |
ROP_27810 | ROP_35890 | ROP_27810 | ROP_35890 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | Hypothetical protein. | 0.675 |
ROP_27810 | hisA | ROP_27810 | ROP_07500 | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase; Protein synonym:phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. | 0.414 |
ROP_27820 | ROP_27800 | ROP_27820 | ROP_27800 | Hypothetical protein. | Putative toxin. | 0.541 |
ROP_27820 | ROP_27810 | ROP_27820 | ROP_27810 | Hypothetical protein. | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.541 |
ROP_29420 | ROP_27800 | ROP_29420 | ROP_27800 | Hypothetical protein. | Putative toxin. | 0.482 |
ROP_29420 | ROP_27810 | ROP_29420 | ROP_27810 | Hypothetical protein. | Putative antitoxin; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.889 |
ROP_29420 | ROP_29430 | ROP_29420 | ROP_29430 | Hypothetical protein. | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. | 0.998 |
page 1 of 2