Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_28160 | ROP_28170 | ROP_28160 | ROP_28170 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | 0.738 |
ROP_28160 | ROP_28180 | ROP_28160 | ROP_28180 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.696 |
ROP_28160 | ROP_28190 | ROP_28160 | ROP_28190 | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | 0.738 |
ROP_28170 | ROP_28160 | ROP_28170 | ROP_28160 | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.738 |
ROP_28170 | ROP_28180 | ROP_28170 | ROP_28180 | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.798 |
ROP_28170 | ROP_28190 | ROP_28170 | ROP_28190 | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | 0.819 |
ROP_28170 | ROP_28960 | ROP_28170 | ROP_28960 | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | Hypothetical protein; Belongs to the CoA-transferase III family. | 0.770 |
ROP_28170 | fas1 | ROP_28170 | ROP_11350 | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | Fatty-acid synthase I. | 0.446 |
ROP_28180 | ROP_28160 | ROP_28180 | ROP_28160 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.696 |
ROP_28180 | ROP_28170 | ROP_28180 | ROP_28170 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | 0.798 |
ROP_28180 | ROP_28190 | ROP_28180 | ROP_28190 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | 0.798 |
ROP_28180 | ROP_30700 | ROP_28180 | ROP_30700 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein. | 0.640 |
ROP_28180 | fadE-11 | ROP_28180 | ROP_23650 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.564 |
ROP_28180 | fadE-14 | ROP_28180 | ROP_25370 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.564 |
ROP_28180 | fadE-35 | ROP_28180 | ROP_67730 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA dehydrogenase. | 0.564 |
ROP_28180 | fas1 | ROP_28180 | ROP_11350 | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | Fatty-acid synthase I. | 0.706 |
ROP_28190 | ROP_28160 | ROP_28190 | ROP_28160 | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | Putative citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family. | 0.738 |
ROP_28190 | ROP_28170 | ROP_28190 | ROP_28170 | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | CaiB/BaiF family protein; Belongs to the CoA-transferase III family. | 0.819 |
ROP_28190 | ROP_28180 | ROP_28190 | ROP_28180 | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.798 |
ROP_28190 | ROP_28960 | ROP_28190 | ROP_28960 | Fatty acid-CoA racemase; Belongs to the CoA-transferase III family. | Hypothetical protein; Belongs to the CoA-transferase III family. | 0.457 |
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