STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_29510Putative proline dehydrogenase. (323 aa)    
Predicted Functional Partners:
ROP_29500
Delta-1-pyrroline-5-carboxylate dehydrogenase.
 0.997
ROP_60130
Delta-1-pyrroline-5-carboxylate dehydrogenase.
 0.990
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.959
pip
Prolyl aminopeptidase; Protein synonym:proline iminopeptidase; Belongs to the peptidase S33 family.
    
 0.908
ROP_29330
Putative prolyl aminopeptidase; Protein synonym:proline iminopeptidase; Belongs to the peptidase S33 family.
    
 0.907
ROP_60140
Putative proline dehydrogenase.
  
  
 
0.901
ROP_29490
Putative CdaR family transcriptional regulator.
 
   
 0.740
ROP_33440
Putative SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.606
ROP_35840
Putative SSS family transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.606
ROP_47290
Putative sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.606
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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