STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_30300Hypothetical protein. (302 aa)    
Predicted Functional Partners:
ROP_53470
Extradiol dioxygenase.
  
     0.716
ROP_46210
Extradiol dioxygenase.
  
     0.661
ROP_23180
Esterase.
 
    0.648
ROP_00990
Putative monooxygenase; Fragment.
 
   
 0.639
ROP_17880
Hypothetical protein.
  
 
 0.629
ROP_25450
Hypothetical protein.
  
     0.615
ROP_48190
Putative lipase.
 
    0.592
ROP_23880
Putative dihydrodipicolinate synthase; Belongs to the DapA family.
 
     0.583
ROP_41350
Hypothetical protein.
 
 0.562
ROP_53440
Hypothetical protein.
 
    0.549
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.