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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_32070Oxidoreductase. (279 aa)    
Predicted Functional Partners:
ROP_53210
Acetoin(diacetyl) reductase; Protein synonym:2,3-butanediol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.921
ROP_70730
Oxidoreductase.
  
  
 
0.919
ROP_13310
2,3-butanediol dehydrogenase.
  
 
 0.913
fas1
Fatty-acid synthase I.
  
 0.728
ROP_58690
Putative oxidoreductase; Fragment.
  
     0.674
fabD
Protein synonym:[acyl-carrier-protein] S-malonyltransferase.
 
 
 0.551
ROP_11150
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.523
ROP_71380
Oxidoreductase.
  
     0.513
ROP_32090
Hypothetical protein.
       0.512
ROP_32080
Putative hydrolase.
       0.492
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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