Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ROP_32550Putative oxidoreductase. (277 aa)    
Predicted Functional Partners:
fas1
Fatty-acid synthase I.
  
 0.694
ROP_43080
Putative enoyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.666
ROP_32540
Putative acetyl-CoA acyltransferase; Protein synonym:acyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.631
ROP_52400
Hypothetical membrane protein.
   
    0.623
fadB-3
Fatty oxidation complex alpha subunit; Multifunctional protein.
 
 0.616
fadB
Fatty oxidation complex alpha subunit; Multifunctional protein.
 
 0.605
ROP_19250
Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.572
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.541
ROP_11090
Putative ABC transporter ATP-binding protein.
  
   0.532
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.530
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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