STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROP_33300Hypothetical protein. (301 aa)    
Predicted Functional Partners:
copA
Putative copper-transporting ATPase CopA.
  
 0.891
ROP_33320
Hypothetical protein.
     
 0.847
copB
Putative copper-transporting ATPase CopB.
 
  
 0.828
copZ
Putative copper chaperone CopZ.
     
 0.820
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
  
 0.573
ROP_58230
Putative glycosidase.
  
 
 0.533
ROP_33280
Putative amino acid transporter.
   
 
 0.529
ROP_49720
Putative oxidoreductase.
  
 
 0.523
ROP_56280
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.523
ROP_02950
Hypothetical protein.
 
   
 0.500
Your Current Organism:
Rhodococcus opacus
NCBI taxonomy Id: 632772
Other names: R. opacus B4, Rhodococcus opacus B4, Rhodococcus opacus str. B4, Rhodococcus opacus strain B4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.