Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_07460 | ROP_16420 | ROP_07460 | ROP_16420 | Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. | Hypothetical membrane protein. | 0.456 |
ROP_07460 | ROP_16430 | ROP_07460 | ROP_16430 | Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. | Hypothetical protein. | 0.491 |
ROP_07460 | ROP_33830 | ROP_07460 | ROP_33830 | Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. | Hypothetical protein. | 0.437 |
ROP_15960 | ROP_15970 | ROP_15960 | ROP_15970 | Hypothetical protein. | Hypothetical membrane protein. | 0.939 |
ROP_15960 | ROP_19250 | ROP_15960 | ROP_19250 | Hypothetical protein. | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.586 |
ROP_15960 | ROP_33830 | ROP_15960 | ROP_33830 | Hypothetical protein. | Hypothetical protein. | 0.415 |
ROP_15960 | pks13 | ROP_15960 | ROP_39430 | Hypothetical protein. | Protein synonym:type I polyketide synthase. | 0.524 |
ROP_15970 | ROP_15960 | ROP_15970 | ROP_15960 | Hypothetical membrane protein. | Hypothetical protein. | 0.939 |
ROP_15970 | ROP_19250 | ROP_15970 | ROP_19250 | Hypothetical membrane protein. | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.586 |
ROP_15970 | ROP_25150 | ROP_15970 | ROP_25150 | Hypothetical membrane protein. | Hypothetical membrane protein. | 0.684 |
ROP_15970 | ROP_33830 | ROP_15970 | ROP_33830 | Hypothetical membrane protein. | Hypothetical protein. | 0.415 |
ROP_15970 | pks13 | ROP_15970 | ROP_39430 | Hypothetical membrane protein. | Protein synonym:type I polyketide synthase. | 0.524 |
ROP_16420 | ROP_07460 | ROP_16420 | ROP_07460 | Hypothetical membrane protein. | Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. | 0.456 |
ROP_16420 | ROP_16430 | ROP_16420 | ROP_16430 | Hypothetical membrane protein. | Hypothetical protein. | 0.973 |
ROP_16420 | ROP_19250 | ROP_16420 | ROP_19250 | Hypothetical membrane protein. | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.586 |
ROP_16420 | ROP_33830 | ROP_16420 | ROP_33830 | Hypothetical membrane protein. | Hypothetical protein. | 0.415 |
ROP_16420 | pks13 | ROP_16420 | ROP_39430 | Hypothetical membrane protein. | Protein synonym:type I polyketide synthase. | 0.587 |
ROP_16430 | ROP_07460 | ROP_16430 | ROP_07460 | Hypothetical protein. | Putative tautomerase; Belongs to the 4-oxalocrotonate tautomerase family. | 0.491 |
ROP_16430 | ROP_16420 | ROP_16430 | ROP_16420 | Hypothetical protein. | Hypothetical membrane protein. | 0.973 |
ROP_16430 | ROP_19250 | ROP_16430 | ROP_19250 | Hypothetical protein. | Putative non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.586 |
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